Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm13183-201ENSMUST00000118615 789 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm24398-201ENSMUST00000157870 109 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm26134-201ENSMUST00000178484 110 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm7319-201ENSMUST00000210047 778 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 AC152922.1-201ENSMUST00000216518 1232 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hmgb1P63158 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hmgb1P63158 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm44178-201ENSMUST00000205229 2930 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Gm11380-201ENSMUST00000118067 560 ntBASIC11.71□□□□□ -0.53
Hmgb1P63158 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.71□□□□□ -0.53
Hmgb1P63158 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.71□□□□□ -0.53
Hmgb1P63158 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Hmgb1P63158 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hmgb1P63158 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Hmgb1P63158 Cntrob-201ENSMUST00000092973 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.71□□□□□ -0.54
Hmgb1P63158 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Hmgb1P63158 1500004A13Rik-205ENSMUST00000184014 2135 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.71□□□□□ -0.54
Hmgb1P63158 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Hmgb1P63158 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hmgb1P63158 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.71□□□□□ -0.54
Hmgb1P63158 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hmgb1P63158 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Hmgb1P63158 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.7□□□□□ -0.54
Hmgb1P63158 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hmgb1P63158 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms