Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Gm32255-201ENSMUST00000219456 1349 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm22481-201ENSMUST00000122562 192 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm10086-201ENSMUST00000136334 354 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm24346-201ENSMUST00000158712 194 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm24300-201ENSMUST00000177809 109 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm24017-201ENSMUST00000178726 109 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm23952-201ENSMUST00000179380 109 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm7761-201ENSMUST00000190510 921 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm30652-201ENSMUST00000199103 430 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm43066-201ENSMUST00000199589 1260 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm36595-201ENSMUST00000218830 2006 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 C920021L13Rik-202ENSMUST00000142433 1330 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm12004-201ENSMUST00000117869 718 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm12338-201ENSMUST00000122170 192 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm25687-201ENSMUST00000175442 241 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm34780-201ENSMUST00000193896 949 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm42599-201ENSMUST00000201308 469 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm6008-201ENSMUST00000206542 874 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Olfr15-201ENSMUST00000080917 939 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Gm11427-201ENSMUST00000117952 1696 ntBASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Usp9yF8VPU6 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Myc-207ENSMUST00000188482 1365 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Hmbox1-209ENSMUST00000176832 1586 ntTSL 5 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm18901-201ENSMUST00000197840 1444 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm5910-201ENSMUST00000211819 1746 ntBASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Usp9yF8VPU6 Gm6141-201ENSMUST00000117181 695 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms