Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Spata33-207ENSMUST00000212760 4074 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm12990-201ENSMUST00000120372 468 ntBASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm22877-201ENSMUST00000175451 105 ntBASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm33080-201ENSMUST00000205429 172 ntBASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm5178-201ENSMUST00000219380 898 ntBASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm19972-201ENSMUST00000218180 5664 ntBASIC11.59□□□□□ -0.55
Chmp6P0C0A3 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp6P0C0A3 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp6P0C0A3 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp6P0C0A3 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Chmp6P0C0A3 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Nln-205ENSMUST00000224945 2486 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm24248-201ENSMUST00000157321 322 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm9487-201ENSMUST00000216600 472 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp6P0C0A3 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC11.57□□□□□ -0.56
Chmp6P0C0A3 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms