Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Snord23-201ENSMUST00000116828 109 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 Gm11411-201ENSMUST00000117951 719 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Gm16570-201ENSMUST00000161951 436 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Mir7070-201ENSMUST00000183657 86 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Gm43380-201ENSMUST00000200421 220 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hmgb1P63158 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.78□□□□□ -0.52
Hmgb1P63158 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.78□□□□□ -0.52
Hmgb1P63158 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hmgb1P63158 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgb1P63158 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgb1P63158 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgb1P63158 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.77□□□□□ -0.52
Hmgb1P63158 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgb1P63158 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Hmgb1P63158 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hmgb1P63158 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Hmgb1P63158 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.52
Hmgb1P63158 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hmgb1P63158 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Hmgb1P63158 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hmgb1P63158 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.77□□□□□ -0.53
Hmgb1P63158 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hmgb1P63158 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.77□□□□□ -0.53
Hmgb1P63158 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.77□□□□□ -0.53
Hmgb1P63158 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.77□□□□□ -0.53
Hmgb1P63158 Gm7880-201ENSMUST00000203748 871 ntBASIC11.77□□□□□ -0.53
Hmgb1P63158 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Hmgb1P63158 Gm2875-201ENSMUST00000211333 360 ntBASIC11.77□□□□□ -0.53
Hmgb1P63158 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hmgb1P63158 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hmgb1P63158 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hmgb1P63158 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hmgb1P63158 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Phactr1-202ENSMUST00000110161 1950 ntTSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmgb1P63158 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hmgb1P63158 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms