Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Mir3091-201ENSMUST00000175086 76 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Atxn1P54254 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.66□□□□□ -0.7
Atxn1P54254 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Atxn1P54254 AC163638.2-201ENSMUST00000224920 827 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.66□□□□□ -0.7
Atxn1P54254 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Atxn1P54254 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Atxn1P54254 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Atxn1P54254 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Atxn1P54254 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Atxn1P54254 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Atxn1P54254 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atxn1P54254 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Atxn1P54254 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Atxn1P54254 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Atxn1P54254 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Atxn1P54254 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC10.65□□□□□ -0.7
Atxn1P54254 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Gm22763-201ENSMUST00000158374 107 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC10.65□□□□□ -0.7
Atxn1P54254 Gm20091-201ENSMUST00000179683 189 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.65□□□□□ -0.7
Atxn1P54254 Gm8824-201ENSMUST00000182962 990 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Gm8707-201ENSMUST00000183325 980 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Gm18014-201ENSMUST00000183369 817 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Gm37009-201ENSMUST00000193297 361 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Atxn1P54254 Gm44498-201ENSMUST00000199509 111 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Gm18124-201ENSMUST00000210695 706 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 AC132384.2-201ENSMUST00000218018 526 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.65□□□□□ -0.7
Atxn1P54254 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
Atxn1P54254 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Rgr-203ENSMUST00000225070 4704 ntBASIC10.65□□□□□ -0.7
Atxn1P54254 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Atxn1P54254 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Atxn1P54254 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Atxn1P54254 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Atxn1P54254 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Atxn1P54254 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Atxn1P54254 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Atxn1P54254 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Atxn1P54254 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC10.65□□□□□ -0.71
Atxn1P54254 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.65□□□□□ -0.71
Atxn1P54254 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Atxn1P54254 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Atxn1P54254 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms