Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rrp8Q9DB85 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm12470-201ENSMUST00000117239 1049 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm16518-201ENSMUST00000117960 508 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm22876-201ENSMUST00000175450 298 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm25591-201ENSMUST00000177317 94 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm18256-201ENSMUST00000209087 907 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm45310-201ENSMUST00000210436 275 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.49□□□□□ -0.73
Rrp8Q9DB85 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.49□□□□□ -0.73
Rrp8Q9DB85 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rrp8Q9DB85 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms