Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.87□□□□□ -0.67
Casc4Q6P2L7 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.87□□□□□ -0.67
Casc4Q6P2L7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Casc4Q6P2L7 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casc4Q6P2L7 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Casc4Q6P2L7 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casc4Q6P2L7 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casc4Q6P2L7 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.87□□□□□ -0.67
Casc4Q6P2L7 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm25562-201ENSMUST00000104608 133 ntBASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm13351-201ENSMUST00000118087 414 ntBASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm33080-201ENSMUST00000205429 172 ntBASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm5178-201ENSMUST00000219380 898 ntBASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Casc4Q6P2L7 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm14234-201ENSMUST00000119539 845 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm38321-201ENSMUST00000195053 235 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm32111-201ENSMUST00000207689 846 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm18059-201ENSMUST00000208073 580 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Gm8162-201ENSMUST00000213951 665 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Casc4Q6P2L7 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms