Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Atxn1P54254 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atxn1P54254 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.7□□□□□ -0.7
Atxn1P54254 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Atxn1P54254 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Atxn1P54254 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.69□□□□□ -0.7
Atxn1P54254 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
Atxn1P54254 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Mir1190-201ENSMUST00000116925 96 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Gm5510-201ENSMUST00000117826 486 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Gm14699-201ENSMUST00000122340 228 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm23432-201ENSMUST00000157181 131 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm44605-201ENSMUST00000206892 949 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm9701-201ENSMUST00000077976 427 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Gm22341-201ENSMUST00000083775 129 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.69□□□□□ -0.7
Atxn1P54254 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Atxn1P54254 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Atxn1P54254 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atxn1P54254 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atxn1P54254 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Atxn1P54254 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.68□□□□□ -0.7
Atxn1P54254 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC10.68□□□□□ -0.7
Atxn1P54254 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms