Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.45□□□□□ -0.26
Nkx2-3P97334 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Gm28916-201ENSMUST00000186988 699 ntBASIC13.45□□□□□ -0.26
Nkx2-3P97334 Gm38247-201ENSMUST00000194675 433 ntBASIC13.45□□□□□ -0.26
Nkx2-3P97334 Gm37301-201ENSMUST00000195412 568 ntBASIC13.45□□□□□ -0.26
Nkx2-3P97334 AC124356.1-201ENSMUST00000221469 698 ntBASIC13.45□□□□□ -0.26
Nkx2-3P97334 CU025215.1-201ENSMUST00000222986 603 ntBASIC13.45□□□□□ -0.26
Nkx2-3P97334 AC134860.5-201ENSMUST00000225071 1249 ntBASIC13.45□□□□□ -0.26
Nkx2-3P97334 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-3P97334 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm37036-201ENSMUST00000192836 2506 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm8216-201ENSMUST00000117232 601 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm15132-201ENSMUST00000118581 652 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx2-3P97334 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm37597-201ENSMUST00000191853 382 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm42687-201ENSMUST00000199075 164 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm8991-201ENSMUST00000073014 1075 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.44□□□□□ -0.26
Nkx2-3P97334 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Nkx2-3P97334 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-3P97334 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gm38271-201ENSMUST00000192296 1603 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gm6939-201ENSMUST00000122029 864 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gm28179-201ENSMUST00000188365 613 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gm19798-201ENSMUST00000201502 457 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gm44908-201ENSMUST00000208610 266 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gm19090-201ENSMUST00000218187 774 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 AC102327.1-201ENSMUST00000226389 742 ntBASIC13.43□□□□□ -0.26
Nkx2-3P97334 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx2-3P97334 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms