Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm7857-201ENSMUST00000117957 358 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm11244-201ENSMUST00000121243 237 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm5733-201ENSMUST00000190232 939 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim13Q9CYB0 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Trim13Q9CYB0 Gm28925-201ENSMUST00000188586 168 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms