Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm20493-201ENSMUST00000173706 213 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm6291-201ENSMUST00000179994 309 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm42710-201ENSMUST00000200608 985 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm45893-201ENSMUST00000211899 247 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh3rf2Q8BZT2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm22495-201ENSMUST00000104492 126 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm5395-201ENSMUST00000121650 915 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm6612-201ENSMUST00000170777 395 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm24954-201ENSMUST00000178831 110 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm28746-201ENSMUST00000187453 380 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm7445-201ENSMUST00000192115 340 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm42779-201ENSMUST00000198807 406 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gm3527-201ENSMUST00000198905 460 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sh3rf2Q8BZT2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm24279-201ENSMUST00000104236 131 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm5510-201ENSMUST00000117826 486 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm11544-201ENSMUST00000120215 382 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Gm5801-201ENSMUST00000182247 780 ntBASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh3rf2Q8BZT2 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms