Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Smyd1-201ENSMUST00000074301 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Cwc22-203ENSMUST00000111819 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm37536-201ENSMUST00000194710 2491 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Cald1-202ENSMUST00000079391 4127 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Atp4a-201ENSMUST00000005692 3485 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Ttc39b-203ENSMUST00000102823 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm38383-201ENSMUST00000194131 2660 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Atp6v1h-205ENSMUST00000192847 1662 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Cntrl-202ENSMUST00000028237 7615 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Cdh18-203ENSMUST00000164787 2744 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Smoc1-201ENSMUST00000021564 3439 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Limk2-204ENSMUST00000110029 2939 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 C86187-202ENSMUST00000209497 2415 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Washc5-202ENSMUST00000227725 2618 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 Ccdc120-201ENSMUST00000033490 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Nsdhl-201ENSMUST00000033715 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gm35394-201ENSMUST00000196434 3252 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Nr2e1-202ENSMUST00000105498 780 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gm12363-201ENSMUST00000122250 668 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gm27838-201ENSMUST00000184829 128 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gm29543-201ENSMUST00000188138 967 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gm29667-201ENSMUST00000190817 490 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gm5276-201ENSMUST00000196683 1047 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gm7619-201ENSMUST00000210649 1282 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 AC156560.2-201ENSMUST00000221232 264 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gm19220-201ENSMUST00000222682 803 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Gpatch2l-201ENSMUST00000071106 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Lpin3-203ENSMUST00000109456 3470 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Phf8-206ENSMUST00000112670 3484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Psat1-201ENSMUST00000025542 2617 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Ufl1-202ENSMUST00000102994 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC8.74□□□□□ -1.01
Trim63Q38HM4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Abca8a-201ENSMUST00000046223 5614 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Cald1-204ENSMUST00000115026 4080 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim63Q38HM4 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim63Q38HM4 Gm43807-201ENSMUST00000200678 1781 ntBASIC8.73□□□□□ -1.01
Trim63Q38HM4 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim63Q38HM4 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Trim63Q38HM4 Gm43311-201ENSMUST00000200016 2377 ntBASIC8.73□□□□□ -1.01
Trim63Q38HM4 Gm42638-201ENSMUST00000196065 2587 ntBASIC8.73□□□□□ -1.01
Trim63Q38HM4 Gm232-201ENSMUST00000216549 2559 ntBASIC8.73□□□□□ -1.01
Trim63Q38HM4 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms