Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.3□□□□□ -0.44
Vcam1P29533 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vcam1P29533 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.3□□□□□ -0.44
Vcam1P29533 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Gm12489-201ENSMUST00000119364 148 ntBASIC12.3□□□□□ -0.44
Vcam1P29533 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Vcam1P29533 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.3□□□□□ -0.44
Vcam1P29533 Gm42780-201ENSMUST00000197083 734 ntBASIC12.3□□□□□ -0.44
Vcam1P29533 Gm5040-201ENSMUST00000218609 800 ntBASIC12.3□□□□□ -0.44
Vcam1P29533 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.3□□□□□ -0.44
Vcam1P29533 Gm8615-201ENSMUST00000025307 771 ntBASIC12.3□□□□□ -0.44
Vcam1P29533 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vcam1P29533 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vcam1P29533 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC12.3□□□□□ -0.44
Vcam1P29533 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vcam1P29533 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vcam1P29533 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vcam1P29533 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.29□□□□□ -0.44
Vcam1P29533 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Vcam1P29533 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vcam1P29533 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vcam1P29533 Gm8216-201ENSMUST00000117232 601 ntBASIC12.29□□□□□ -0.44
Vcam1P29533 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC12.29□□□□□ -0.44
Vcam1P29533 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Vcam1P29533 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.29□□□□□ -0.44
Vcam1P29533 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.29□□□□□ -0.44
Vcam1P29533 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Gm5189-201ENSMUST00000221796 261 ntBASIC12.29□□□□□ -0.44
Vcam1P29533 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vcam1P29533 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.29□□□□□ -0.44
Vcam1P29533 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vcam1P29533 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Vcam1P29533 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC12.29□□□□□ -0.44
Vcam1P29533 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vcam1P29533 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 A1cf-204ENSMUST00000224564 1432 ntBASIC12.28□□□□□ -0.44
Vcam1P29533 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.28□□□□□ -0.44
Vcam1P29533 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vcam1P29533 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms