Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Gm23251-201ENSMUST00000103773 110 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Gm23272-201ENSMUST00000104053 129 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.31□□□□□ -0.92
UbbP0CG49 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Gm14277-201ENSMUST00000121195 360 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Gm45398-201ENSMUST00000210561 165 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.31□□□□□ -0.92
UbbP0CG49 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
UbbP0CG49 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.31□□□□□ -0.92
UbbP0CG49 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
UbbP0CG49 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Mir877-201ENSMUST00000104738 85 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm9133-201ENSMUST00000118289 540 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 Gm13422-201ENSMUST00000118834 504 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 Gm11836-201ENSMUST00000121022 441 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.3□□□□□ -0.92
UbbP0CG49 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.3□□□□□ -0.92
UbbP0CG49 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm28450-201ENSMUST00000187349 638 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.3□□□□□ -0.92
UbbP0CG49 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
UbbP0CG49 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
UbbP0CG49 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
UbbP0CG49 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
UbbP0CG49 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.3□□□□□ -0.92
UbbP0CG49 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
UbbP0CG49 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.3□□□□□ -0.92
UbbP0CG49 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
UbbP0CG49 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms