Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Gm28450-201ENSMUST00000187349 638 ntBASIC10.52□□□□□ -0.73
Slc1a6O35544 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC10.52□□□□□ -0.73
Slc1a6O35544 Gm37826-201ENSMUST00000195329 322 ntBASIC10.52□□□□□ -0.73
Slc1a6O35544 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Slc1a6O35544 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.52□□□□□ -0.73
Slc1a6O35544 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.52□□□□□ -0.73
Slc1a6O35544 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.52□□□□□ -0.73
Slc1a6O35544 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Slc1a6O35544 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC10.52□□□□□ -0.73
Slc1a6O35544 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc1a6O35544 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Slc1a6O35544 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc1a6O35544 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc1a6O35544 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC10.52□□□□□ -0.73
Slc1a6O35544 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc1a6O35544 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc1a6O35544 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.51□□□□□ -0.73
Slc1a6O35544 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm11824-201ENSMUST00000120191 846 ntBASIC10.51□□□□□ -0.73
Slc1a6O35544 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm23699-201ENSMUST00000158835 135 ntBASIC10.51□□□□□ -0.73
Slc1a6O35544 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc1a6O35544 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.51□□□□□ -0.73
Slc1a6O35544 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.51□□□□□ -0.73
Slc1a6O35544 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc1a6O35544 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.51□□□□□ -0.73
Slc1a6O35544 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.5□□□□□ -0.73
Slc1a6O35544 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC10.5□□□□□ -0.73
Slc1a6O35544 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Slc1a6O35544 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms