Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pcdh1F7BJK1 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm15554-201ENSMUST00000120406 913 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm44315-201ENSMUST00000203041 219 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Ginm1-202ENSMUST00000065124 300 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm37583-201ENSMUST00000195460 2487 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Pcdh1F7BJK1 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm14667-201ENSMUST00000119448 1350 ntBASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm9062-201ENSMUST00000117712 727 ntBASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm13422-201ENSMUST00000118834 504 ntBASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm5599-201ENSMUST00000209602 788 ntBASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Pcdh1F7BJK1 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 126.7 ms