Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CopeO89079 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CopeO89079 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.02□□□□□ -0.64
CopeO89079 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.02□□□□□ -0.64
CopeO89079 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
CopeO89079 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CopeO89079 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
CopeO89079 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CopeO89079 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.02□□□□□ -0.65
CopeO89079 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.02□□□□□ -0.65
CopeO89079 Mir1893-201ENSMUST00000122565 83 ntBASIC11.02□□□□□ -0.65
CopeO89079 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.02□□□□□ -0.65
CopeO89079 Gm16165-201ENSMUST00000160140 795 ntBASIC11.02□□□□□ -0.65
CopeO89079 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CopeO89079 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.02□□□□□ -0.65
CopeO89079 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.02□□□□□ -0.65
CopeO89079 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.02□□□□□ -0.65
CopeO89079 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.02□□□□□ -0.65
CopeO89079 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.02□□□□□ -0.65
CopeO89079 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CopeO89079 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CopeO89079 Gm7357-201ENSMUST00000195361 2991 ntBASIC11.02□□□□□ -0.65
CopeO89079 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CopeO89079 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.02□□□□□ -0.65
CopeO89079 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CopeO89079 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC11.02□□□□□ -0.65
CopeO89079 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CopeO89079 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CopeO89079 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CopeO89079 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.01□□□□□ -0.65
CopeO89079 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CopeO89079 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.01□□□□□ -0.65
CopeO89079 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
CopeO89079 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
CopeO89079 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CopeO89079 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.01□□□□□ -0.65
CopeO89079 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CopeO89079 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.01□□□□□ -0.65
CopeO89079 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.01□□□□□ -0.65
CopeO89079 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.01□□□□□ -0.65
CopeO89079 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
CopeO89079 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Gm45867-201ENSMUST00000208201 2317 ntBASIC11.01□□□□□ -0.65
CopeO89079 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CopeO89079 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CopeO89079 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CopeO89079 Gm29101-201ENSMUST00000188329 1471 ntBASIC11□□□□□ -0.65
CopeO89079 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11□□□□□ -0.65
CopeO89079 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CopeO89079 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CopeO89079 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CopeO89079 Rims2-204ENSMUST00000226410 3685 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms