Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm20091-201ENSMUST00000179683 189 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm8707-201ENSMUST00000183325 980 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm37597-201ENSMUST00000191853 382 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm5738-201ENSMUST00000206016 779 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm44908-201ENSMUST00000208610 266 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm18256-201ENSMUST00000209087 907 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Gm44863-201ENSMUST00000207613 1422 ntBASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx6-1Q99MA9 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm15626-201ENSMUST00000117478 868 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm26957-201ENSMUST00000182645 977 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm27833-201ENSMUST00000184285 124 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm18552-201ENSMUST00000187425 538 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 AC132384.2-201ENSMUST00000218018 526 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm5040-201ENSMUST00000218609 800 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Mir341-201ENSMUST00000093593 96 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm10537-201ENSMUST00000192625 1698 ntBASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx6-1Q99MA9 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms