Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm16518-201ENSMUST00000117960 508 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm4654-201ENSMUST00000183305 982 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm45398-201ENSMUST00000210561 165 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm23200-201ENSMUST00000104379 132 ntBASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm13284-201ENSMUST00000121020 547 ntBASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm2260-201ENSMUST00000184965 657 ntBASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Ginm1-202ENSMUST00000065124 300 ntBASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scaf4Q6PFF0 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms