Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ube4bQ9ES00 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ube4bQ9ES00 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4bQ9ES00 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.1■□□□□ 0.65
Ube4bQ9ES00 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4bQ9ES00 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ube4bQ9ES00 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.1■□□□□ 0.65
Ube4bQ9ES00 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ube4bQ9ES00 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ube4bQ9ES00 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ube4bQ9ES00 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Ube4bQ9ES00 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.08■□□□□ 0.65
Ube4bQ9ES00 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ube4bQ9ES00 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.08■□□□□ 0.64
Ube4bQ9ES00 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube4bQ9ES00 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube4bQ9ES00 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ube4bQ9ES00 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ube4bQ9ES00 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ube4bQ9ES00 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ube4bQ9ES00 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube4bQ9ES00 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ube4bQ9ES00 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube4bQ9ES00 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ube4bQ9ES00 Gm11175-201ENSMUST00000116172 543 ntBASIC19.06■□□□□ 0.64
Ube4bQ9ES00 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ube4bQ9ES00 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube4bQ9ES00 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ube4bQ9ES00 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.05■□□□□ 0.64
Ube4bQ9ES00 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ube4bQ9ES00 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4bQ9ES00 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms