Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne8Q9DC53 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.97■□□□□ 0.95
Cpne8Q9DC53 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne8Q9DC53 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne8Q9DC53 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne8Q9DC53 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Etf1-202ENSMUST00000180351 108 ntBASIC20.96■□□□□ 0.95
Cpne8Q9DC53 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.96■□□□□ 0.95
Cpne8Q9DC53 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpne8Q9DC53 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne8Q9DC53 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne8Q9DC53 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne8Q9DC53 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne8Q9DC53 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.94■□□□□ 0.94
Cpne8Q9DC53 Gm7417-201ENSMUST00000192950 473 ntBASIC20.94■□□□□ 0.94
Cpne8Q9DC53 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne8Q9DC53 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Gm9870-201ENSMUST00000063874 645 ntBASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cpne8Q9DC53 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.92■□□□□ 0.94
Cpne8Q9DC53 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne8Q9DC53 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.9■□□□□ 0.94
Cpne8Q9DC53 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne8Q9DC53 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpne8Q9DC53 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.89■□□□□ 0.94
Cpne8Q9DC53 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cpne8Q9DC53 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpne8Q9DC53 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne8Q9DC53 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne8Q9DC53 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms