Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Calr3Q9D9Q6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Calr3Q9D9Q6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Calr3Q9D9Q6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Calr3Q9D9Q6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.59■□□□□ 0.89
Calr3Q9D9Q6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Calr3Q9D9Q6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Calr3Q9D9Q6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Calr3Q9D9Q6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Calr3Q9D9Q6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Calr3Q9D9Q6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Calr3Q9D9Q6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Calr3Q9D9Q6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Calr3Q9D9Q6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Calr3Q9D9Q6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Calr3Q9D9Q6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Calr3Q9D9Q6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calr3Q9D9Q6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.55■□□□□ 0.88
Calr3Q9D9Q6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Calr3Q9D9Q6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Calr3Q9D9Q6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Calr3Q9D9Q6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.53■□□□□ 0.88
Calr3Q9D9Q6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calr3Q9D9Q6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calr3Q9D9Q6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calr3Q9D9Q6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calr3Q9D9Q6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calr3Q9D9Q6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Calr3Q9D9Q6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calr3Q9D9Q6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calr3Q9D9Q6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Calr3Q9D9Q6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Calr3Q9D9Q6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Calr3Q9D9Q6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Calr3Q9D9Q6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Calr3Q9D9Q6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Calr3Q9D9Q6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Calr3Q9D9Q6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Calr3Q9D9Q6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms