Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmem54Q9D7S1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmem54Q9D7S1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tmem54Q9D7S1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.54■□□□□ 0.4
Tmem54Q9D7S1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tmem54Q9D7S1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Gm12821-201ENSMUST00000120022 600 ntBASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Gm43137-201ENSMUST00000198052 594 ntBASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tmem54Q9D7S1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Tmem54Q9D7S1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tmem54Q9D7S1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tmem54Q9D7S1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tmem54Q9D7S1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tmem54Q9D7S1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tmem54Q9D7S1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tmem54Q9D7S1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tmem54Q9D7S1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Gm27454-201ENSMUST00000185090 204 ntBASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tmem54Q9D7S1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tmem54Q9D7S1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tmem54Q9D7S1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmem54Q9D7S1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.47■□□□□ 0.39
Tmem54Q9D7S1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmem54Q9D7S1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmem54Q9D7S1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tmem54Q9D7S1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tmem54Q9D7S1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Tmem54Q9D7S1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms