Protein–RNA interactions for Protein: Q9D312

Krt20, Keratin, type I cytoskeletal 20, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt20Q9D312 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt20Q9D312 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt20Q9D312 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.7■□□□□ 0.91
Krt20Q9D312 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.7■□□□□ 0.9
Krt20Q9D312 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt20Q9D312 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Krt20Q9D312 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Krt20Q9D312 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt20Q9D312 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Krt20Q9D312 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt20Q9D312 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt20Q9D312 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt20Q9D312 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt20Q9D312 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt20Q9D312 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.69■□□□□ 0.9
Krt20Q9D312 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Krt20Q9D312 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt20Q9D312 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt20Q9D312 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Krt20Q9D312 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.68■□□□□ 0.9
Krt20Q9D312 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.68■□□□□ 0.9
Krt20Q9D312 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt20Q9D312 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt20Q9D312 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt20Q9D312 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt20Q9D312 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt20Q9D312 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt20Q9D312 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Krt20Q9D312 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Krt20Q9D312 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt20Q9D312 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Krt20Q9D312 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt20Q9D312 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt20Q9D312 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt20Q9D312 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt20Q9D312 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.66■□□□□ 0.9
Krt20Q9D312 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Krt20Q9D312 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Krt20Q9D312 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt20Q9D312 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt20Q9D312 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt20Q9D312 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt20Q9D312 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Krt20Q9D312 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt20Q9D312 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.65■□□□□ 0.9
Krt20Q9D312 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Krt20Q9D312 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt20Q9D312 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Krt20Q9D312 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Krt20Q9D312 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Krt20Q9D312 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt20Q9D312 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Krt20Q9D312 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt20Q9D312 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Krt20Q9D312 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.64■□□□□ 0.89
Krt20Q9D312 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Krt20Q9D312 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt20Q9D312 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt20Q9D312 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt20Q9D312 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Krt20Q9D312 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt20Q9D312 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.63■□□□□ 0.89
Krt20Q9D312 Gm9870-201ENSMUST00000063874 645 ntBASIC20.63■□□□□ 0.89
Krt20Q9D312 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt20Q9D312 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt20Q9D312 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt20Q9D312 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt20Q9D312 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Krt20Q9D312 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt20Q9D312 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Krt20Q9D312 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt20Q9D312 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Krt20Q9D312 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Krt20Q9D312 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt20Q9D312 Rps24-207ENSMUST00000224568 714 ntBASIC20.62■□□□□ 0.89
Krt20Q9D312 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt20Q9D312 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Krt20Q9D312 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt20Q9D312 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Krt20Q9D312 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt20Q9D312 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Krt20Q9D312 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Krt20Q9D312 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms