Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1r1Q9CYQ5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Gm11175-201ENSMUST00000116172 543 ntBASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hcfc1r1Q9CYQ5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1r1Q9CYQ5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1r1Q9CYQ5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1r1Q9CYQ5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1r1Q9CYQ5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1r1Q9CYQ5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.28■□□□□ 0.36
Hcfc1r1Q9CYQ5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1r1Q9CYQ5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1r1Q9CYQ5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1r1Q9CYQ5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcfc1r1Q9CYQ5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hcfc1r1Q9CYQ5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcfc1r1Q9CYQ5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Hcfc1r1Q9CYQ5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.27■□□□□ 0.36
Hcfc1r1Q9CYQ5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hcfc1r1Q9CYQ5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcfc1r1Q9CYQ5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcfc1r1Q9CYQ5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcfc1r1Q9CYQ5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcfc1r1Q9CYQ5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hcfc1r1Q9CYQ5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcfc1r1Q9CYQ5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms