Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cnot11Q9CWN7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cnot11Q9CWN7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cnot11Q9CWN7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnot11Q9CWN7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnot11Q9CWN7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnot11Q9CWN7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnot11Q9CWN7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnot11Q9CWN7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.42■□□□□ 0.7
Cnot11Q9CWN7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cnot11Q9CWN7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cnot11Q9CWN7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cnot11Q9CWN7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cnot11Q9CWN7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cnot11Q9CWN7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cnot11Q9CWN7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.4■□□□□ 0.7
Cnot11Q9CWN7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.4■□□□□ 0.7
Cnot11Q9CWN7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cnot11Q9CWN7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cnot11Q9CWN7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cnot11Q9CWN7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cnot11Q9CWN7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cnot11Q9CWN7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.39■□□□□ 0.69
Cnot11Q9CWN7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cnot11Q9CWN7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cnot11Q9CWN7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cnot11Q9CWN7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cnot11Q9CWN7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cnot11Q9CWN7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.39■□□□□ 0.69
Cnot11Q9CWN7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cnot11Q9CWN7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cnot11Q9CWN7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.36■□□□□ 0.69
Cnot11Q9CWN7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms