Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim16Q99PP9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.44■□□□□ 0.7
Trim16Q99PP9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Trim16Q99PP9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim16Q99PP9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim16Q99PP9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim16Q99PP9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim16Q99PP9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim16Q99PP9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim16Q99PP9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim16Q99PP9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim16Q99PP9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim16Q99PP9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
Trim16Q99PP9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim16Q99PP9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim16Q99PP9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim16Q99PP9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim16Q99PP9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim16Q99PP9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim16Q99PP9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim16Q99PP9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim16Q99PP9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim16Q99PP9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Trim16Q99PP9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim16Q99PP9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim16Q99PP9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim16Q99PP9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim16Q99PP9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim16Q99PP9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim16Q99PP9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms