Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col25a1Q99MQ5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col25a1Q99MQ5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col25a1Q99MQ5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col25a1Q99MQ5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.86■□□□□ 0.93
Col25a1Q99MQ5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col25a1Q99MQ5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col25a1Q99MQ5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col25a1Q99MQ5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col25a1Q99MQ5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col25a1Q99MQ5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.85■□□□□ 0.93
Col25a1Q99MQ5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Gm20049-201ENSMUST00000219950 730 ntBASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.84■□□□□ 0.93
Col25a1Q99MQ5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 Gm7514-201ENSMUST00000209475 934 ntBASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Col25a1Q99MQ5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col25a1Q99MQ5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col25a1Q99MQ5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col25a1Q99MQ5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col25a1Q99MQ5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col25a1Q99MQ5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col25a1Q99MQ5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Col25a1Q99MQ5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col25a1Q99MQ5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.82■□□□□ 0.92
Col25a1Q99MQ5 Gm37856-201ENSMUST00000191634 999 ntBASIC20.82■□□□□ 0.92
Col25a1Q99MQ5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 Gm13234-201ENSMUST00000120010 747 ntBASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col25a1Q99MQ5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col25a1Q99MQ5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col25a1Q99MQ5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Gm10819-201ENSMUST00000099988 561 ntBASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col25a1Q99MQ5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col25a1Q99MQ5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms