Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.81■□□□□ 0.44
Thumpd1Q99J36 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Thumpd1Q99J36 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.8■□□□□ 0.44
Thumpd1Q99J36 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd1Q99J36 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.8■□□□□ 0.44
Thumpd1Q99J36 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd1Q99J36 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd1Q99J36 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Thumpd1Q99J36 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd1Q99J36 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Thumpd1Q99J36 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd1Q99J36 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd1Q99J36 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.78■□□□□ 0.44
Thumpd1Q99J36 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd1Q99J36 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd1Q99J36 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd1Q99J36 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd1Q99J36 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd1Q99J36 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Gm12366-201ENSMUST00000121722 873 ntBASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Gm5786-201ENSMUST00000085368 882 ntBASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd1Q99J36 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Thumpd1Q99J36 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Thumpd1Q99J36 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Thumpd1Q99J36 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd1Q99J36 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Thumpd1Q99J36 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Gm11175-201ENSMUST00000116172 543 ntBASIC17.74■□□□□ 0.43
Thumpd1Q99J36 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms