Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Usp3Q91W36 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp3Q91W36 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Usp3Q91W36 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp3Q91W36 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Usp3Q91W36 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.69■□□□□ 0.9
Usp3Q91W36 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp3Q91W36 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp3Q91W36 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp3Q91W36 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp3Q91W36 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp3Q91W36 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp3Q91W36 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp3Q91W36 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp3Q91W36 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp3Q91W36 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp3Q91W36 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp3Q91W36 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp3Q91W36 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp3Q91W36 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp3Q91W36 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp3Q91W36 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.67■□□□□ 0.9
Usp3Q91W36 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp3Q91W36 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp3Q91W36 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Usp3Q91W36 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp3Q91W36 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp3Q91W36 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp3Q91W36 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp3Q91W36 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp3Q91W36 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.66■□□□□ 0.9
Usp3Q91W36 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Usp3Q91W36 Gm12251-201ENSMUST00000117893 792 ntBASIC20.66■□□□□ 0.9
Usp3Q91W36 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Usp3Q91W36 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.66■□□□□ 0.9
Usp3Q91W36 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp3Q91W36 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Usp3Q91W36 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp3Q91W36 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp3Q91W36 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.65■□□□□ 0.9
Usp3Q91W36 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp3Q91W36 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Usp3Q91W36 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp3Q91W36 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp3Q91W36 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp3Q91W36 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Usp3Q91W36 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Usp3Q91W36 Spcs1-204ENSMUST00000226782 949 ntBASIC20.64■□□□□ 0.89
Usp3Q91W36 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp3Q91W36 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp3Q91W36 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp3Q91W36 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Usp3Q91W36 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp3Q91W36 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.63■□□□□ 0.89
Usp3Q91W36 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp3Q91W36 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp3Q91W36 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Usp3Q91W36 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp3Q91W36 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Usp3Q91W36 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp3Q91W36 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp3Q91W36 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Usp3Q91W36 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.62■□□□□ 0.89
Usp3Q91W36 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp3Q91W36 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp3Q91W36 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp3Q91W36 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.62■□□□□ 0.89
Usp3Q91W36 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp3Q91W36 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp3Q91W36 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp3Q91W36 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.61■□□□□ 0.89
Usp3Q91W36 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp3Q91W36 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp3Q91W36 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.61■□□□□ 0.89
Usp3Q91W36 Gm8493-201ENSMUST00000196881 489 ntBASIC20.61■□□□□ 0.89
Usp3Q91W36 Gm43173-201ENSMUST00000202246 593 ntBASIC20.61■□□□□ 0.89
Usp3Q91W36 Serp2-204ENSMUST00000228055 705 ntBASIC20.61■□□□□ 0.89
Usp3Q91W36 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp3Q91W36 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp3Q91W36 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp3Q91W36 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Usp3Q91W36 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms