Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H1fooQ8VIK3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.73■□□□□ 0.27
H1fooQ8VIK3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H1fooQ8VIK3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
H1fooQ8VIK3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
H1fooQ8VIK3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
H1fooQ8VIK3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.72■□□□□ 0.27
H1fooQ8VIK3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
H1fooQ8VIK3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H1fooQ8VIK3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H1fooQ8VIK3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H1fooQ8VIK3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.7■□□□□ 0.26
H1fooQ8VIK3 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.7■□□□□ 0.26
H1fooQ8VIK3 Gm9959-201ENSMUST00000068277 390 ntBASIC16.7■□□□□ 0.26
H1fooQ8VIK3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H1fooQ8VIK3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Gm9870-201ENSMUST00000063874 645 ntBASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
H1fooQ8VIK3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.68■□□□□ 0.26
H1fooQ8VIK3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H1fooQ8VIK3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H1fooQ8VIK3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H1fooQ8VIK3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
H1fooQ8VIK3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H1fooQ8VIK3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H1fooQ8VIK3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H1fooQ8VIK3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H1fooQ8VIK3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
H1fooQ8VIK3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
H1fooQ8VIK3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H1fooQ8VIK3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H1fooQ8VIK3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H1fooQ8VIK3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms