Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rab40bQ8VHP8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab40bQ8VHP8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rab40bQ8VHP8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab40bQ8VHP8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab40bQ8VHP8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.99■□□□□ 0.47
Rab40bQ8VHP8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab40bQ8VHP8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.98■□□□□ 0.47
Rab40bQ8VHP8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab40bQ8VHP8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab40bQ8VHP8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.98■□□□□ 0.47
Rab40bQ8VHP8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab40bQ8VHP8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab40bQ8VHP8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
Rab40bQ8VHP8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rab40bQ8VHP8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rab40bQ8VHP8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Gm11175-201ENSMUST00000116172 543 ntBASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Gm12366-201ENSMUST00000121722 873 ntBASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Gm5786-201ENSMUST00000085368 882 ntBASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rab40bQ8VHP8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms