Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Mir6236-201ENSMUST00000184437 123 ntBASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.3■■□□□ 1.16
Ddx39aQ8VDW0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.29■■□□□ 1.16
Ddx39aQ8VDW0 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.29■■□□□ 1.16
Ddx39aQ8VDW0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.29■■□□□ 1.16
Ddx39aQ8VDW0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.29■■□□□ 1.16
Ddx39aQ8VDW0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx39aQ8VDW0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx39aQ8VDW0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.29■■□□□ 1.16
Ddx39aQ8VDW0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx39aQ8VDW0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx39aQ8VDW0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Ddx39aQ8VDW0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx39aQ8VDW0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx39aQ8VDW0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.28■■□□□ 1.16
Ddx39aQ8VDW0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx39aQ8VDW0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx39aQ8VDW0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx39aQ8VDW0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
Ddx39aQ8VDW0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx39aQ8VDW0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ddx39aQ8VDW0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx39aQ8VDW0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx39aQ8VDW0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx39aQ8VDW0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.25■■□□□ 1.15
Ddx39aQ8VDW0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Ddx39aQ8VDW0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx39aQ8VDW0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.24■■□□□ 1.15
Ddx39aQ8VDW0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx39aQ8VDW0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx39aQ8VDW0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx39aQ8VDW0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx39aQ8VDW0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Ddx39aQ8VDW0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx39aQ8VDW0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx39aQ8VDW0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx39aQ8VDW0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx39aQ8VDW0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx39aQ8VDW0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
Ddx39aQ8VDW0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.22■■□□□ 1.15
Ddx39aQ8VDW0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx39aQ8VDW0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx39aQ8VDW0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx39aQ8VDW0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx39aQ8VDW0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx39aQ8VDW0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ddx39aQ8VDW0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx39aQ8VDW0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx39aQ8VDW0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx39aQ8VDW0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ddx39aQ8VDW0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Ddx39aQ8VDW0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx39aQ8VDW0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ddx39aQ8VDW0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Ddx39aQ8VDW0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx39aQ8VDW0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx39aQ8VDW0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms