Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps39Q8R5L3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps39Q8R5L3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vps39Q8R5L3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Vps39Q8R5L3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.02■□□□□ 0.8
Vps39Q8R5L3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps39Q8R5L3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Vps39Q8R5L3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vps39Q8R5L3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Vps39Q8R5L3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vps39Q8R5L3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps39Q8R5L3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Vps39Q8R5L3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps39Q8R5L3 Gm7417-201ENSMUST00000192950 473 ntBASIC20.01■□□□□ 0.79
Vps39Q8R5L3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps39Q8R5L3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps39Q8R5L3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Vps39Q8R5L3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vps39Q8R5L3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20■□□□□ 0.79
Vps39Q8R5L3 Gm15546-201ENSMUST00000122095 826 ntBASIC20■□□□□ 0.79
Vps39Q8R5L3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20■□□□□ 0.79
Vps39Q8R5L3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vps39Q8R5L3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Vps39Q8R5L3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps39Q8R5L3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.99■□□□□ 0.79
Vps39Q8R5L3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps39Q8R5L3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps39Q8R5L3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps39Q8R5L3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps39Q8R5L3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps39Q8R5L3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Gm9870-201ENSMUST00000063874 645 ntBASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps39Q8R5L3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Vps39Q8R5L3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps39Q8R5L3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps39Q8R5L3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Vps39Q8R5L3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps39Q8R5L3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps39Q8R5L3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.94■□□□□ 0.78
Vps39Q8R5L3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps39Q8R5L3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps39Q8R5L3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Vps39Q8R5L3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps39Q8R5L3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps39Q8R5L3 Etf1-202ENSMUST00000180351 108 ntBASIC19.93■□□□□ 0.78
Vps39Q8R5L3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps39Q8R5L3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms