Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chrna3Q8R4G9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna3Q8R4G9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna3Q8R4G9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna3Q8R4G9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna3Q8R4G9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna3Q8R4G9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna3Q8R4G9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chrna3Q8R4G9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Chrna3Q8R4G9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna3Q8R4G9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna3Q8R4G9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Chrna3Q8R4G9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.63■□□□□ 0.73
Chrna3Q8R4G9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna3Q8R4G9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna3Q8R4G9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna3Q8R4G9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chrna3Q8R4G9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna3Q8R4G9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.62■□□□□ 0.73
Chrna3Q8R4G9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna3Q8R4G9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna3Q8R4G9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chrna3Q8R4G9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Serp2-204ENSMUST00000228055 705 ntBASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chrna3Q8R4G9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chrna3Q8R4G9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chrna3Q8R4G9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chrna3Q8R4G9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.58■□□□□ 0.72
Chrna3Q8R4G9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Chrna3Q8R4G9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.57■□□□□ 0.72
Chrna3Q8R4G9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chrna3Q8R4G9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chrna3Q8R4G9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chrna3Q8R4G9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.57■□□□□ 0.72
Chrna3Q8R4G9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chrna3Q8R4G9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chrna3Q8R4G9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Chrna3Q8R4G9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chrna3Q8R4G9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.55■□□□□ 0.72
Chrna3Q8R4G9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.55■□□□□ 0.72
Chrna3Q8R4G9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.55■□□□□ 0.72
Chrna3Q8R4G9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chrna3Q8R4G9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chrna3Q8R4G9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chrna3Q8R4G9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms