Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cchcr1Q8K2I2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cchcr1Q8K2I2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cchcr1Q8K2I2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cchcr1Q8K2I2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cchcr1Q8K2I2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cchcr1Q8K2I2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Gm9870-201ENSMUST00000063874 645 ntBASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cchcr1Q8K2I2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Gm7417-201ENSMUST00000192950 473 ntBASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cchcr1Q8K2I2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cchcr1Q8K2I2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Cchcr1Q8K2I2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.64■■□□□ 1.38
Cchcr1Q8K2I2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cchcr1Q8K2I2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cchcr1Q8K2I2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cchcr1Q8K2I2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cchcr1Q8K2I2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cchcr1Q8K2I2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cchcr1Q8K2I2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cchcr1Q8K2I2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cchcr1Q8K2I2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Gm15546-201ENSMUST00000122095 826 ntBASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cchcr1Q8K2I2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cchcr1Q8K2I2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cchcr1Q8K2I2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cchcr1Q8K2I2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Cchcr1Q8K2I2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cchcr1Q8K2I2 Mir6236-201ENSMUST00000184437 123 ntBASIC23.62■■□□□ 1.37
Cchcr1Q8K2I2 Gm43530-201ENSMUST00000195920 274 ntBASIC23.62■■□□□ 1.37
Cchcr1Q8K2I2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cchcr1Q8K2I2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cchcr1Q8K2I2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cchcr1Q8K2I2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cchcr1Q8K2I2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cchcr1Q8K2I2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cchcr1Q8K2I2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cchcr1Q8K2I2 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.59■■□□□ 1.37
Cchcr1Q8K2I2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cchcr1Q8K2I2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cchcr1Q8K2I2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cchcr1Q8K2I2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cchcr1Q8K2I2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cchcr1Q8K2I2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.58■■□□□ 1.37
Cchcr1Q8K2I2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cchcr1Q8K2I2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cchcr1Q8K2I2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cchcr1Q8K2I2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cchcr1Q8K2I2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.58■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms