Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scara5Q8K299 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scara5Q8K299 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.08■□□□□ 0.81
Scara5Q8K299 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.08■□□□□ 0.81
Scara5Q8K299 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.08■□□□□ 0.8
Scara5Q8K299 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scara5Q8K299 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Scara5Q8K299 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scara5Q8K299 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Scara5Q8K299 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scara5Q8K299 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Scara5Q8K299 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Scara5Q8K299 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Scara5Q8K299 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Scara5Q8K299 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scara5Q8K299 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Scara5Q8K299 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scara5Q8K299 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scara5Q8K299 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scara5Q8K299 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scara5Q8K299 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scara5Q8K299 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.06■□□□□ 0.8
Scara5Q8K299 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scara5Q8K299 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scara5Q8K299 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.06■□□□□ 0.8
Scara5Q8K299 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scara5Q8K299 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.05■□□□□ 0.8
Scara5Q8K299 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.05■□□□□ 0.8
Scara5Q8K299 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scara5Q8K299 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scara5Q8K299 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scara5Q8K299 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scara5Q8K299 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.04■□□□□ 0.8
Scara5Q8K299 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scara5Q8K299 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.04■□□□□ 0.8
Scara5Q8K299 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scara5Q8K299 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scara5Q8K299 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scara5Q8K299 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scara5Q8K299 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scara5Q8K299 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scara5Q8K299 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scara5Q8K299 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.03■□□□□ 0.8
Scara5Q8K299 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.03■□□□□ 0.8
Scara5Q8K299 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.03■□□□□ 0.8
Scara5Q8K299 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scara5Q8K299 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scara5Q8K299 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scara5Q8K299 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scara5Q8K299 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scara5Q8K299 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Scara5Q8K299 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scara5Q8K299 Gm11421-201ENSMUST00000122124 294 ntBASIC20.02■□□□□ 0.8
Scara5Q8K299 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.02■□□□□ 0.8
Scara5Q8K299 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.02■□□□□ 0.8
Scara5Q8K299 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scara5Q8K299 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scara5Q8K299 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scara5Q8K299 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scara5Q8K299 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Scara5Q8K299 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scara5Q8K299 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scara5Q8K299 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scara5Q8K299 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.01■□□□□ 0.79
Scara5Q8K299 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scara5Q8K299 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scara5Q8K299 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scara5Q8K299 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scara5Q8K299 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.01■□□□□ 0.79
Scara5Q8K299 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Gm12933-201ENSMUST00000120203 872 ntBASIC20■□□□□ 0.79
Scara5Q8K299 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20■□□□□ 0.79
Scara5Q8K299 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scara5Q8K299 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scara5Q8K299 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scara5Q8K299 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scara5Q8K299 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scara5Q8K299 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Scara5Q8K299 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scara5Q8K299 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scara5Q8K299 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scara5Q8K299 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scara5Q8K299 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Scara5Q8K299 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scara5Q8K299 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Scara5Q8K299 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scara5Q8K299 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.98■□□□□ 0.79
Scara5Q8K299 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms