Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.14■■□□□ 1.3
Rtn1Q8K0T0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Rtn1Q8K0T0 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.14■■□□□ 1.29
Rtn1Q8K0T0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Rtn1Q8K0T0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtn1Q8K0T0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Rtn1Q8K0T0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn1Q8K0T0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn1Q8K0T0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.13■■□□□ 1.29
Rtn1Q8K0T0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rtn1Q8K0T0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn1Q8K0T0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn1Q8K0T0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn1Q8K0T0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn1Q8K0T0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn1Q8K0T0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn1Q8K0T0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn1Q8K0T0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rtn1Q8K0T0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rtn1Q8K0T0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.08■■□□□ 1.29
Rtn1Q8K0T0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rtn1Q8K0T0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rtn1Q8K0T0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rtn1Q8K0T0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rtn1Q8K0T0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rtn1Q8K0T0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rtn1Q8K0T0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rtn1Q8K0T0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rtn1Q8K0T0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtn1Q8K0T0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtn1Q8K0T0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtn1Q8K0T0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.07■■□□□ 1.28
Rtn1Q8K0T0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
Rtn1Q8K0T0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.07■■□□□ 1.28
Rtn1Q8K0T0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.06■■□□□ 1.28
Rtn1Q8K0T0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rtn1Q8K0T0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rtn1Q8K0T0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Rtn1Q8K0T0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.06■■□□□ 1.28
Rtn1Q8K0T0 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.06■■□□□ 1.28
Rtn1Q8K0T0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rtn1Q8K0T0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtn1Q8K0T0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtn1Q8K0T0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rtn1Q8K0T0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtn1Q8K0T0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.04■■□□□ 1.28
Rtn1Q8K0T0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtn1Q8K0T0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtn1Q8K0T0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtn1Q8K0T0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms