Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox30Q8CGW4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox30Q8CGW4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox30Q8CGW4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox30Q8CGW4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sox30Q8CGW4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox30Q8CGW4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sox30Q8CGW4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox30Q8CGW4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.05■■□□□ 1.12
Sox30Q8CGW4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.05■■□□□ 1.12
Sox30Q8CGW4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.05■■□□□ 1.12
Sox30Q8CGW4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox30Q8CGW4 Gm5921-201ENSMUST00000075898 882 ntBASIC22.05■■□□□ 1.12
Sox30Q8CGW4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox30Q8CGW4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sox30Q8CGW4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.04■■□□□ 1.12
Sox30Q8CGW4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.04■■□□□ 1.12
Sox30Q8CGW4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox30Q8CGW4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox30Q8CGW4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox30Q8CGW4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.04■■□□□ 1.12
Sox30Q8CGW4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox30Q8CGW4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox30Q8CGW4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sox30Q8CGW4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox30Q8CGW4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox30Q8CGW4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Sox30Q8CGW4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox30Q8CGW4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox30Q8CGW4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox30Q8CGW4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sox30Q8CGW4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sox30Q8CGW4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox30Q8CGW4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox30Q8CGW4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.02■■□□□ 1.12
Sox30Q8CGW4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
Sox30Q8CGW4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
Sox30Q8CGW4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox30Q8CGW4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox30Q8CGW4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox30Q8CGW4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox30Q8CGW4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.01■■□□□ 1.11
Sox30Q8CGW4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sox30Q8CGW4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sox30Q8CGW4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox30Q8CGW4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22■■□□□ 1.11
Sox30Q8CGW4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Sox30Q8CGW4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox30Q8CGW4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Sox30Q8CGW4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.99■■□□□ 1.11
Sox30Q8CGW4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox30Q8CGW4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Sox30Q8CGW4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox30Q8CGW4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox30Q8CGW4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox30Q8CGW4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox30Q8CGW4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox30Q8CGW4 Cap2-205ENSMUST00000225824 1634 ntBASIC21.98■■□□□ 1.11
Sox30Q8CGW4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Sox30Q8CGW4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sox30Q8CGW4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox30Q8CGW4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox30Q8CGW4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.98■■□□□ 1.11
Sox30Q8CGW4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox30Q8CGW4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Mir6236-201ENSMUST00000184437 123 ntBASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Gm10232-201ENSMUST00000089221 720 ntBASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox30Q8CGW4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
Sox30Q8CGW4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sox30Q8CGW4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sox30Q8CGW4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sox30Q8CGW4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Sox30Q8CGW4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Sox30Q8CGW4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sox30Q8CGW4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Sox30Q8CGW4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox30Q8CGW4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox30Q8CGW4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox30Q8CGW4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Sox30Q8CGW4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Sox30Q8CGW4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms