Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc46a2Q8CA03 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Gm10420-201ENSMUST00000121713 882 ntBASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc46a2Q8CA03 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc46a2Q8CA03 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Slc46a2Q8CA03 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Slc46a2Q8CA03 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc46a2Q8CA03 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc46a2Q8CA03 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc46a2Q8CA03 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc46a2Q8CA03 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc46a2Q8CA03 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc46a2Q8CA03 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc46a2Q8CA03 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc46a2Q8CA03 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc46a2Q8CA03 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc46a2Q8CA03 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc46a2Q8CA03 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc46a2Q8CA03 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc46a2Q8CA03 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc46a2Q8CA03 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc46a2Q8CA03 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc46a2Q8CA03 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc46a2Q8CA03 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc46a2Q8CA03 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc46a2Q8CA03 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc46a2Q8CA03 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Slc46a2Q8CA03 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Slc46a2Q8CA03 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc46a2Q8CA03 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc46a2Q8CA03 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc46a2Q8CA03 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc46a2Q8CA03 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc46a2Q8CA03 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.14■□□□□ 0.65
Slc46a2Q8CA03 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc46a2Q8CA03 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms