Protein–RNA interactions for Protein: Q8C7B8

Zswim4, Zinc finger SWIM domain-containing protein 4, mousemouse

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim4Q8C7B8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zswim4Q8C7B8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Zswim4Q8C7B8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.3■■□□□ 1
Zswim4Q8C7B8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zswim4Q8C7B8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.3■■□□□ 1
Zswim4Q8C7B8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.3■■□□□ 1
Zswim4Q8C7B8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zswim4Q8C7B8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
Zswim4Q8C7B8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Zswim4Q8C7B8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zswim4Q8C7B8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.28■■□□□ 1
Zswim4Q8C7B8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zswim4Q8C7B8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Zswim4Q8C7B8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zswim4Q8C7B8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zswim4Q8C7B8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zswim4Q8C7B8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zswim4Q8C7B8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zswim4Q8C7B8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zswim4Q8C7B8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim4Q8C7B8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim4Q8C7B8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim4Q8C7B8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim4Q8C7B8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim4Q8C7B8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim4Q8C7B8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim4Q8C7B8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Zswim4Q8C7B8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.26■□□□□ 0.99
Zswim4Q8C7B8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Gm27502-201ENSMUST00000183495 199 ntBASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zswim4Q8C7B8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zswim4Q8C7B8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zswim4Q8C7B8 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.22■□□□□ 0.99
Zswim4Q8C7B8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim4Q8C7B8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim4Q8C7B8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim4Q8C7B8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim4Q8C7B8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.22■□□□□ 0.99
Zswim4Q8C7B8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zswim4Q8C7B8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim4Q8C7B8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim4Q8C7B8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim4Q8C7B8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.21■□□□□ 0.99
Zswim4Q8C7B8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim4Q8C7B8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zswim4Q8C7B8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zswim4Q8C7B8 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.2■□□□□ 0.98
Zswim4Q8C7B8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.2■□□□□ 0.98
Zswim4Q8C7B8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zswim4Q8C7B8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zswim4Q8C7B8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
Zswim4Q8C7B8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zswim4Q8C7B8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zswim4Q8C7B8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim4Q8C7B8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zswim4Q8C7B8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms