Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.14■□□□□ 0.97
Brat1Q8C3R1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Brat1Q8C3R1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.13■□□□□ 0.97
Brat1Q8C3R1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Brat1Q8C3R1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Brat1Q8C3R1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Gm12251-201ENSMUST00000117893 792 ntBASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Gm6139-201ENSMUST00000079261 882 ntBASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Brat1Q8C3R1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brat1Q8C3R1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Spcs1-204ENSMUST00000226782 949 ntBASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Brat1Q8C3R1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Brat1Q8C3R1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Brat1Q8C3R1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Brat1Q8C3R1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Brat1Q8C3R1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Brat1Q8C3R1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Brat1Q8C3R1 Gm8493-201ENSMUST00000196881 489 ntBASIC21.08■□□□□ 0.97
Brat1Q8C3R1 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.08■□□□□ 0.97
Brat1Q8C3R1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Brat1Q8C3R1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.07■□□□□ 0.96
Brat1Q8C3R1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.07■□□□□ 0.96
Brat1Q8C3R1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Brat1Q8C3R1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Brat1Q8C3R1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.07■□□□□ 0.96
Brat1Q8C3R1 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.07■□□□□ 0.96
Brat1Q8C3R1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Brat1Q8C3R1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brat1Q8C3R1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Brat1Q8C3R1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Brat1Q8C3R1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Brat1Q8C3R1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.05■□□□□ 0.96
Brat1Q8C3R1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Brat1Q8C3R1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Brat1Q8C3R1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms