Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Cps1Q8C196 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Cps1Q8C196 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cps1Q8C196 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cps1Q8C196 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC27.58■■■□□ 2.01
Cps1Q8C196 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cps1Q8C196 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cps1Q8C196 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC27.58■■■□□ 2.01
Cps1Q8C196 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cps1Q8C196 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Cps1Q8C196 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC27.57■■■□□ 2
Cps1Q8C196 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cps1Q8C196 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
Cps1Q8C196 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cps1Q8C196 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC27.56■■■□□ 2
Cps1Q8C196 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Cps1Q8C196 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC27.56■■■□□ 2
Cps1Q8C196 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC27.56■■■□□ 2
Cps1Q8C196 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC27.56■■■□□ 2
Cps1Q8C196 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC27.56■■■□□ 2
Cps1Q8C196 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
Cps1Q8C196 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Cps1Q8C196 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC27.55■■■□□ 2
Cps1Q8C196 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Cps1Q8C196 Gm10571-201ENSMUST00000097869 1638 ntBASIC27.55■■■□□ 2
Cps1Q8C196 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC27.54■■■□□ 2
Cps1Q8C196 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC27.54■■■□□ 2
Cps1Q8C196 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Cps1Q8C196 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC27.54■■■□□ 2
Cps1Q8C196 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Cps1Q8C196 CT030146.1-201ENSMUST00000220919 217 ntBASIC27.53■■■□□ 2
Cps1Q8C196 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cps1Q8C196 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cps1Q8C196 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC27.52■■■□□ 2
Cps1Q8C196 Gm42555-201ENSMUST00000199304 1039 ntBASIC27.52■■■□□ 2
Cps1Q8C196 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Cps1Q8C196 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
Cps1Q8C196 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Cps1Q8C196 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cps1Q8C196 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cps1Q8C196 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cps1Q8C196 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Cps1Q8C196 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cps1Q8C196 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cps1Q8C196 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cps1Q8C196 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
Cps1Q8C196 Gm10653-202ENSMUST00000139570 835 ntBASIC27.5■■□□□ 1.99
Cps1Q8C196 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Cps1Q8C196 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cps1Q8C196 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cps1Q8C196 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Cps1Q8C196 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC27.49■■□□□ 1.99
Cps1Q8C196 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cps1Q8C196 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Cps1Q8C196 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cps1Q8C196 Nespas-201ENSMUST00000143738 1083 ntBASIC27.48■■□□□ 1.99
Cps1Q8C196 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cps1Q8C196 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cps1Q8C196 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC27.48■■□□□ 1.99
Cps1Q8C196 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Cps1Q8C196 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Cps1Q8C196 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cps1Q8C196 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cps1Q8C196 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC27.47■■□□□ 1.99
Cps1Q8C196 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cps1Q8C196 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cps1Q8C196 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cps1Q8C196 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC27.46■■□□□ 1.99
Cps1Q8C196 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC27.46■■□□□ 1.99
Cps1Q8C196 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cps1Q8C196 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cps1Q8C196 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cps1Q8C196 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cps1Q8C196 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Cps1Q8C196 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cps1Q8C196 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cps1Q8C196 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cps1Q8C196 Gm12441-201ENSMUST00000121806 588 ntBASIC27.46■■□□□ 1.99
Cps1Q8C196 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC27.46■■□□□ 1.99
Cps1Q8C196 Gm7514-201ENSMUST00000209475 934 ntBASIC27.46■■□□□ 1.99
Cps1Q8C196 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cps1Q8C196 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Cps1Q8C196 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
Cps1Q8C196 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC27.45■■□□□ 1.98
Cps1Q8C196 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cps1Q8C196 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC27.45■■□□□ 1.98
Cps1Q8C196 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Cps1Q8C196 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cps1Q8C196 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cps1Q8C196 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC27.44■■□□□ 1.98
Cps1Q8C196 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cps1Q8C196 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cps1Q8C196 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Cps1Q8C196 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Cps1Q8C196 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Cps1Q8C196 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Cps1Q8C196 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cps1Q8C196 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Cps1Q8C196 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Cps1Q8C196 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms