Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a2Q8BY89 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc44a2Q8BY89 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a2Q8BY89 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a2Q8BY89 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a2Q8BY89 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Slc44a2Q8BY89 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a2Q8BY89 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slc44a2Q8BY89 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.39■□□□□ 0.7
Slc44a2Q8BY89 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Slc44a2Q8BY89 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a2Q8BY89 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc44a2Q8BY89 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc44a2Q8BY89 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc44a2Q8BY89 Gm43566-201ENSMUST00000196851 808 ntBASIC19.38■□□□□ 0.69
Slc44a2Q8BY89 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc44a2Q8BY89 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slc44a2Q8BY89 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc44a2Q8BY89 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc44a2Q8BY89 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc44a2Q8BY89 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Slc44a2Q8BY89 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc44a2Q8BY89 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc44a2Q8BY89 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc44a2Q8BY89 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.33■□□□□ 0.69
Slc44a2Q8BY89 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
Slc44a2Q8BY89 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.33■□□□□ 0.68
Slc44a2Q8BY89 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc44a2Q8BY89 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.33■□□□□ 0.68
Slc44a2Q8BY89 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.33■□□□□ 0.68
Slc44a2Q8BY89 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc44a2Q8BY89 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.32■□□□□ 0.68
Slc44a2Q8BY89 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc44a2Q8BY89 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms