Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne3Q8BT60 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.27■□□□□ 0.68
Cpne3Q8BT60 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cpne3Q8BT60 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne3Q8BT60 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.27■□□□□ 0.68
Cpne3Q8BT60 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne3Q8BT60 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cpne3Q8BT60 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpne3Q8BT60 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne3Q8BT60 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne3Q8BT60 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Cpne3Q8BT60 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne3Q8BT60 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne3Q8BT60 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne3Q8BT60 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne3Q8BT60 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.23■□□□□ 0.67
Cpne3Q8BT60 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne3Q8BT60 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpne3Q8BT60 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.2■□□□□ 0.66
Cpne3Q8BT60 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpne3Q8BT60 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpne3Q8BT60 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.2■□□□□ 0.66
Cpne3Q8BT60 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpne3Q8BT60 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpne3Q8BT60 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpne3Q8BT60 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.19■□□□□ 0.66
Cpne3Q8BT60 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne3Q8BT60 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne3Q8BT60 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.19■□□□□ 0.66
Cpne3Q8BT60 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cpne3Q8BT60 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne3Q8BT60 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne3Q8BT60 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpne3Q8BT60 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne3Q8BT60 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne3Q8BT60 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne3Q8BT60 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpne3Q8BT60 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.18■□□□□ 0.66
Cpne3Q8BT60 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.18■□□□□ 0.66
Cpne3Q8BT60 Gm7143-201ENSMUST00000222811 859 ntBASIC19.18■□□□□ 0.66
Cpne3Q8BT60 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms