Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smco3Q8BQM7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smco3Q8BQM7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Gm11687-201ENSMUST00000118911 886 ntBASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smco3Q8BQM7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smco3Q8BQM7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smco3Q8BQM7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smco3Q8BQM7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smco3Q8BQM7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.4■□□□□ 0.22
Smco3Q8BQM7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smco3Q8BQM7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smco3Q8BQM7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smco3Q8BQM7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms