Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4bQ8BGE6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4bQ8BGE6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4bQ8BGE6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Atg4bQ8BGE6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Atg4bQ8BGE6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4bQ8BGE6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Mir6236-201ENSMUST00000184437 123 ntBASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atg4bQ8BGE6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Atg4bQ8BGE6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4bQ8BGE6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4bQ8BGE6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4bQ8BGE6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4bQ8BGE6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4bQ8BGE6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atg4bQ8BGE6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atg4bQ8BGE6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atg4bQ8BGE6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atg4bQ8BGE6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Atg4bQ8BGE6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms