Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm18671-201ENSMUST00000214826 683 ntBASIC21.81■■□□□ 1.08
Sh3tc2Q80VA5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.81■■□□□ 1.08
Sh3tc2Q80VA5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Sh3tc2Q80VA5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Sh3tc2Q80VA5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3tc2Q80VA5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3tc2Q80VA5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3tc2Q80VA5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3tc2Q80VA5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3tc2Q80VA5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3tc2Q80VA5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3tc2Q80VA5 Smad6-203ENSMUST00000179458 273 ntBASIC21.79■■□□□ 1.08
Sh3tc2Q80VA5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3tc2Q80VA5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3tc2Q80VA5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3tc2Q80VA5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Sh3tc2Q80VA5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3tc2Q80VA5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3tc2Q80VA5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3tc2Q80VA5 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.78■■□□□ 1.08
Sh3tc2Q80VA5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3tc2Q80VA5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3tc2Q80VA5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3tc2Q80VA5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3tc2Q80VA5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3tc2Q80VA5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3tc2Q80VA5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3tc2Q80VA5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Sh3tc2Q80VA5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.76■■□□□ 1.07
Sh3tc2Q80VA5 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.75■■□□□ 1.07
Sh3tc2Q80VA5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3tc2Q80VA5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3tc2Q80VA5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.75■■□□□ 1.07
Sh3tc2Q80VA5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.75■■□□□ 1.07
Sh3tc2Q80VA5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3tc2Q80VA5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 AV356131-201ENSMUST00000206201 750 ntBASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.74■■□□□ 1.07
Sh3tc2Q80VA5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Gm10033-202ENSMUST00000211874 928 ntBASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Sh3tc2Q80VA5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.72■■□□□ 1.07
Sh3tc2Q80VA5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3tc2Q80VA5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3tc2Q80VA5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Sh3tc2Q80VA5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3tc2Q80VA5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.71■■□□□ 1.07
Sh3tc2Q80VA5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Sh3tc2Q80VA5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
Sh3tc2Q80VA5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Sh3tc2Q80VA5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Sh3tc2Q80VA5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.7■■□□□ 1.06
Sh3tc2Q80VA5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3tc2Q80VA5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3tc2Q80VA5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3tc2Q80VA5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms