Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.77■□□□□ 0.76
Scaf4Q6PFF0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf4Q6PFF0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf4Q6PFF0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Scaf4Q6PFF0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf4Q6PFF0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf4Q6PFF0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf4Q6PFF0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scaf4Q6PFF0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scaf4Q6PFF0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scaf4Q6PFF0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scaf4Q6PFF0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf4Q6PFF0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf4Q6PFF0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf4Q6PFF0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf4Q6PFF0 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.74■□□□□ 0.75
Scaf4Q6PFF0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf4Q6PFF0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf4Q6PFF0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scaf4Q6PFF0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf4Q6PFF0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Scaf4Q6PFF0 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.73■□□□□ 0.75
Scaf4Q6PFF0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf4Q6PFF0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf4Q6PFF0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scaf4Q6PFF0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scaf4Q6PFF0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scaf4Q6PFF0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scaf4Q6PFF0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scaf4Q6PFF0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scaf4Q6PFF0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms