Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sp140Q6NSQ5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sp140Q6NSQ5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sp140Q6NSQ5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Sp140Q6NSQ5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.33■□□□□ 0.85
Sp140Q6NSQ5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.33■□□□□ 0.85
Sp140Q6NSQ5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sp140Q6NSQ5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sp140Q6NSQ5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sp140Q6NSQ5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Sp140Q6NSQ5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sp140Q6NSQ5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Gm22238-201ENSMUST00000175222 88 ntBASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sp140Q6NSQ5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Golph3-202ENSMUST00000226517 2359 ntBASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Gm14117-201ENSMUST00000122417 843 ntBASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sp140Q6NSQ5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sp140Q6NSQ5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sp140Q6NSQ5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sp140Q6NSQ5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sp140Q6NSQ5 Gm43530-201ENSMUST00000195920 274 ntBASIC20.29■□□□□ 0.84
Sp140Q6NSQ5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.29■□□□□ 0.84
Sp140Q6NSQ5 Gm45102-201ENSMUST00000207427 857 ntBASIC20.29■□□□□ 0.84
Sp140Q6NSQ5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sp140Q6NSQ5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sp140Q6NSQ5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Sp140Q6NSQ5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sp140Q6NSQ5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sp140Q6NSQ5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.27■□□□□ 0.84
Sp140Q6NSQ5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sp140Q6NSQ5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.27■□□□□ 0.84
Sp140Q6NSQ5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Sp140Q6NSQ5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sp140Q6NSQ5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sp140Q6NSQ5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sp140Q6NSQ5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sp140Q6NSQ5 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms